Release of 186 additional GWAS studies

July 1st, 2009 | Posted by rcf8 in News | Uncategorized - (Comments Off on Release of 186 additional GWAS studies)

Release of 186 additional GWAS studies from:

1. NHGRI GWAS Catalogue
2. An Open Access Database of Genome-wide Association Results

This brings the number of GWAS studies available in HGVbaseG2P to 305 with 291 available for analysis in the HGVbaseG2P browser.

New release of HGVbaseG2P with improved browser and new datasets

May 19th, 2009 | Posted by rcf8 in News | Uncategorized - (Comments Off on New release of HGVbaseG2P with improved browser and new datasets)

Multiple studies can now be compared using our sophisticated new browser. We have also extended the database with data from over a hundred new studies:

1. NHGRI GWAS Catalogue
2. An Open Access Database of Genome-wide Association Results

New release of web site with advanced marker reporting

April 9th, 2009 | Posted by rcf8 in News | Uncategorized - (Comments Off on New release of web site with advanced marker reporting)

This release (v2.2) provides tools to create and view marker reports containing:

1. The most significant markers in a single study through the studies list and individual study reports.
2. The most significant markers in selected studies through the browser.
3. All markers used in selected studies within a region of interest, using our browser Region View.

Enhancements made to genome and region viewers

September 10th, 2008 | Posted by rcf8 in News | Uncategorized - (Comments Off on Enhancements made to genome and region viewers)

Additional refinements to visualisation tools. This includes instant access to Genome Views in a Study (with a switchable linear or log based scale), improved gene information in the genome region view and easy access to significance and display settings.

New viewer and analysis tool for HGVbaseG2P datasets

August 20th, 2008 | Posted by rcf8 in News | Uncategorized - (Comments Off on New viewer and analysis tool for HGVbaseG2P datasets)

The graphical display of association signals in HGVbaseG2P has been made more powerful and informative via a new approach to data visualisation that presents information in genome-wide and chromosomal contexts, as well as at higher resolution alongside gene maps. Data presentation parameters are customisable so that users can graphically explore datasets to locate biologically significant regions and markers.

DAS support enabled in HGVbaseG2P

August 20th, 2008 | Posted by rcf8 in News | Uncategorized - (Comments Off on DAS support enabled in HGVbaseG2P)

HGVbaseG2P now provides Distributed Annotation System (DAS) functionality so that datsets of interest can be remotely viewed in Ensembl or any other DAS compatible browser.

HGVbaseG2P content update

August 20th, 2008 | Posted by rcf8 in News | Uncategorized - (Comments Off on HGVbaseG2P content update)

The content of HGVbaseG2P has been significantly increased by the addition of 8 new genome-wide association studies (GWAS), including data from the Wellcome Trust Case Control Consortium.

HGVmart server goes live

August 20th, 2008 | Posted by rcf8 in News | Uncategorized - (Comments Off on HGVmart server goes live)

Options for searching HGVbaseG2P have been dramatically enhanced by the launch of a new HGVmart function (based upon the BioMart technology) which enables sophisticated interrogation across all the datasets in HGVbaseG2P, and large scale data extraction.

HGVbaseG2P goes live!

July 1st, 2008 | Posted by tb143 in News | Uncategorized - (Comments Off on HGVbaseG2P goes live!)

HGVbaseG2P goes live with genetic association study data from six genome-wide association studies (GWAS), plus the full marker content from dbSNP (build 129).